CDS

Accession Number TCMCG017C14043
gbkey CDS
Protein Id OMO95328.1
Location complement(join(11190..11436,12244..12310,13094..13277,13360..13407,13525..13656,13767..13821,13997..14046,14167..14262,14372..14449,14599..14673,14783..14899,14978..15046,15173..15325,15438..15608,15701..15835,15974..15991))
GeneID InterPro:IPR001030
Organism Corchorus olitorius
locus_tag COLO4_15975

Protein

Length 564aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01015849.1
Definition Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha [Corchorus olitorius]
Locus_tag COLO4_15975

EGGNOG-MAPPER Annotation

COG_category E
Description 3-isopropylmalate dehydratase
KEGG_TC -
KEGG_Module M00432        [VIEW IN KEGG]
M00535        [VIEW IN KEGG]
KEGG_Reaction R03896        [VIEW IN KEGG]
R03898        [VIEW IN KEGG]
R03968        [VIEW IN KEGG]
R04001        [VIEW IN KEGG]
R08620        [VIEW IN KEGG]
R08624        [VIEW IN KEGG]
R08628        [VIEW IN KEGG]
R08634        [VIEW IN KEGG]
R08641        [VIEW IN KEGG]
R08645        [VIEW IN KEGG]
R10170        [VIEW IN KEGG]
KEGG_rclass RC00497        [VIEW IN KEGG]
RC00976        [VIEW IN KEGG]
RC00977        [VIEW IN KEGG]
RC01041        [VIEW IN KEGG]
RC01046        [VIEW IN KEGG]
RC03072        [VIEW IN KEGG]
BRITE br01601        [VIEW IN KEGG]
ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K01703        [VIEW IN KEGG]
EC 4.2.1.33        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
4.2.1.35        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00290        [VIEW IN KEGG]
ko00660        [VIEW IN KEGG]
ko00966        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko01210        [VIEW IN KEGG]
ko01230        [VIEW IN KEGG]
map00290        [VIEW IN KEGG]
map00660        [VIEW IN KEGG]
map00966        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map01210        [VIEW IN KEGG]
map01230        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006790        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0010038        [VIEW IN EMBL-EBI]
GO:0016143        [VIEW IN EMBL-EBI]
GO:0016144        [VIEW IN EMBL-EBI]
GO:0016853        [VIEW IN EMBL-EBI]
GO:0016866        [VIEW IN EMBL-EBI]
GO:0019748        [VIEW IN EMBL-EBI]
GO:0019757        [VIEW IN EMBL-EBI]
GO:0019758        [VIEW IN EMBL-EBI]
GO:0019760        [VIEW IN EMBL-EBI]
GO:0019761        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044272        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044550        [VIEW IN EMBL-EBI]
GO:0046686        [VIEW IN EMBL-EBI]
GO:0050486        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:1901135        [VIEW IN EMBL-EBI]
GO:1901137        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901657        [VIEW IN EMBL-EBI]
GO:1901659        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCATCTTCGTCTTCGAAAAATGTTAGTCTCTCTGCCTTCACTTCAACATCACAACTTTGCTCCTACAAATGCAAGAAAGGAGTTTCCAAGGAAATCATGATGGTCATGGCACCACAACAATCAGAACGCAAGCCTGCCACCACTGGCTCGGTCAAGATTCCAATGACTATGACAGAAAAGATTCTTGCTAGGGCCTCTGAGAAACCTCAATTGAGACCTGGTGACAACGTTTGGGTTAATGTTGATGTATTCATGACTAATGATATTAGTGGTCCTGGTTCCATTGGTATCTTCAATAAAGAATTTGGTGAAAATGCTAAGGTTTGGGACCGTGAAAAGGTTGTTGTTATACCTGACCATTATATATTCACAACTGATGAACGTGCAAATCGTAATGTGGACATCTTGAGAGACTTCTCCATGGAGCAAAATATCAAGTACTTTTATGATATCAAAGATCTTAGTAATTTTAAGGCTAACCCTGACTACAAAGGTGTATGCCATGTTGCACTTGCTCAAGAAGGTCATTGCAGGCCAGGAGAGGTTTTATTAGGGACAGATTCTCACACCTGTACTGCTGGAGCATTTGGTCAGTTTGCTACAGGAATTGGAAATACAGAAGCAGGATTTGTATTAGGCACCGGGAAGCTTTTGCTCAAGGTGCCGCCAAGCTTGAGATTCGTGTTAGATGGTGAAATGCCTGATTATTTGCTTGCCAAGGATTTGATTTTGCAGATCATTGGTGAAATTTCTGTGGCCGGTGCAACATATAAATCCATGGAATTCATGGGCACTACCGTTGAAAGTCTAAATATGGAGGAAAGGATGACATTGTGCAATATGGTTATTGAAGCTGGTGGAAAGAACGGTGTTGTTCCTGCTGATAGCACCACATTTAAGTACTTGGAGGATAAAACATCATTGCCATATGAACCTGTTTTCAGTGATGCACAAGCAAGTTTTCTTTCAGAGTTCAGATTTGATGTCTCCAAATTGGAGCCCTTGGTAGCTAAGCCTCATTCTCCTGATAATCGCGCTTTGGCAAGAGAATGCAAAGATATTAGAATTGACAGAGTCTATATTGGATCTTGCACTGGTGGAAAGACAGAAGATTTCCTTGCTGCTGCTAAAGTCTTCTTAACTTCTGGCAAAAAGGTGAAAGTCCCCACATTCCTTGTCCCGGGTACTCAAAAGGTTTGGATGGACATATATACTCTCACGGTACCAGGATCTGGTGGCAAGACTTGCTCCCAAATATTTGAAGAAGCCGGCTGCGATACACCTGCAAGTCCTAGTTGTGCTGCTTGCATGGGTGGCCCTAGAGACACATATGCACGCATGAATGAAGCTCAGGCAAGTTTTCTTCAGACGATGATGAACCTCCCAACTGGTATGATCATGGAGATACTCTCATGGCTTCCTTTGAAATCCCTTTCCAAGTGCAGCCATTTTCAACACTCCGATCCACTGATGCTGCTCTTCAAGAAACACTGCTATCCACTGATGCTCTTGAAGAATGGGAGAATGCTATTGTCATACAACGACAAGGAGGTCGTTTGTTACAATCTGAAAAGGAAGAGATTCACGAAGACTGATATTTATGCTAAAAAAGATTACTTCTTCTTAGTGGCATACACCCCATGTTTTGTTTCACTGAAGGATGTTGCAAAAGGAGAACAAATCTCAAGATAA
Protein:  
MASSSSKNVSLSAFTSTSQLCSYKCKKGVSKEIMMVMAPQQSERKPATTGSVKIPMTMTEKILARASEKPQLRPGDNVWVNVDVFMTNDISGPGSIGIFNKEFGENAKVWDREKVVVIPDHYIFTTDERANRNVDILRDFSMEQNIKYFYDIKDLSNFKANPDYKGVCHVALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTEAGFVLGTGKLLLKVPPSLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFMGTTVESLNMEERMTLCNMVIEAGGKNGVVPADSTTFKYLEDKTSLPYEPVFSDAQASFLSEFRFDVSKLEPLVAKPHSPDNRALARECKDIRIDRVYIGSCTGGKTEDFLAAAKVFLTSGKKVKVPTFLVPGTQKVWMDIYTLTVPGSGGKTCSQIFEEAGCDTPASPSCAACMGGPRDTYARMNEAQASFLQTMMNLPTGMIMEILSWLPLKSLSKCSHFQHSDPLMLLFKKHCYPLMLLKNGRMLLSYNDKEVVCYNLKRKRFTKTDIYAKKDYFFLVAYTPCFVSLKDVAKGEQISR